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gnu: r-destiny: Update to 3.0.0.

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* gnu/packages/bioconductor.scm (r-destiny): Update to 3.0.0.
[propagated-inputs]: Add r-ggplot-multistats, r-irlba, r-knn-covertree,
r-pcamethods, r-rcpphnsw, r-rspectra, r-singlecellexperiment, r-tidyr, and
r-tidyselect; remove r-igraph.
This commit is contained in:
Ricardo Wurmus 2019-12-15 15:37:46 +01:00
parent b4ee414880
commit 6e10ac0780
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1 changed files with 11 additions and 3 deletions
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gnu/packages/bioconductor.scm
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@ -2102,29 +2102,37 @@ possible, parallelization is achieved using the BiocParallel framework.")
(define-public r-destiny (define-public r-destiny
(package (package
(name "r-destiny") (name "r-destiny")
(version "2.14.0") (version "3.0.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "destiny" version)) (uri (bioconductor-uri "destiny" version))
(sha256 (sha256
(base32 (base32
"1bpa114fgrknn6415g4d1jrvb924nkwi18jzfqribpvcf1vlgrf3")))) "0vj9nk8g6i4vzm6cnzvbsqcvyk6fhmx0a0nxxrciarffyhqk81yz"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-biobase" ,r-biobase) `(("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics) ("r-biocgenerics" ,r-biocgenerics)
("r-ggplot-multistats" ,r-ggplot-multistats)
("r-ggplot2" ,r-ggplot2) ("r-ggplot2" ,r-ggplot2)
("r-ggthemes" ,r-ggthemes) ("r-ggthemes" ,r-ggthemes)
("r-igraph" ,r-igraph) ("r-irlba" ,r-irlba)
("r-knn-covertree" ,r-knn-covertree)
("r-matrix" ,r-matrix) ("r-matrix" ,r-matrix)
("r-pcamethods" ,r-pcamethods)
("r-proxy" ,r-proxy) ("r-proxy" ,r-proxy)
("r-rcpp" ,r-rcpp) ("r-rcpp" ,r-rcpp)
("r-rcppeigen" ,r-rcppeigen) ("r-rcppeigen" ,r-rcppeigen)
("r-rcpphnsw" ,r-rcpphnsw)
("r-rspectra" ,r-rspectra)
("r-scales" ,r-scales) ("r-scales" ,r-scales)
("r-scatterplot3d" ,r-scatterplot3d) ("r-scatterplot3d" ,r-scatterplot3d)
("r-singlecellexperiment" ,r-singlecellexperiment)
("r-smoother" ,r-smoother) ("r-smoother" ,r-smoother)
("r-summarizedexperiment" ,r-summarizedexperiment) ("r-summarizedexperiment" ,r-summarizedexperiment)
("r-tidyr" ,r-tidyr)
("r-tidyselect" ,r-tidyselect)
("r-vim" ,r-vim))) ("r-vim" ,r-vim)))
(home-page "https://bioconductor.org/packages/destiny/") (home-page "https://bioconductor.org/packages/destiny/")
(synopsis "Create and plot diffusion maps") (synopsis "Create and plot diffusion maps")