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gnu: Add r-greylistchip.

* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
master
Roel Janssen 2020-11-18 16:47:44 +01:00 committed by Ricardo Wurmus
parent c84762c446
commit 6e396c4bff
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1 changed files with 27 additions and 0 deletions

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@ -1657,6 +1657,33 @@ effect sizes for a variety of GLM models, using approximation of the
posterior for individual coefficients.")
(license license:gpl2)))
(define-public r-greylistchip
(package
(name "r-greylistchip")
(version "1.22.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GreyListChIP" version))
(sha256
(base32
"1d1yvza1aw3vs3di6mrra5l52ig0p9bpzprrqvknjaz5i4yb8ma6"))))
(properties `((upstream-name . "GreyListChIP")))
(build-system r-build-system)
(propagated-inputs
`(("r-bsgenome" ,r-bsgenome)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-mass" ,r-mass)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "https://bioconductor.org/packages/GreyListChIP")
(synopsis "Greylist artefact regions based on ChIP inputs")
(description "This package identifies regions of ChIP experiments with high
signal in the input, that lead to spurious peaks during peak calling.")
(license license:artistic2.0)))
(define-public r-diffbind
(package
(name "r-diffbind")