me
/
guix
Archived
1
0
Fork 0

gnu: Add r-genomicstate.

* gnu/packages/bioconductor.scm (r-genomicstate): New variable.

Change-Id: I1b86c8e849af7b69b5fa9ea2a0e43b4e3e1850b2
master
Ricardo Wurmus 2024-01-20 19:43:18 +01:00
parent 4e706e6b18
commit 6f93502ced
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 31 additions and 0 deletions

View File

@ -16289,6 +16289,37 @@ type and symbol colors.")
position-specific scores within R and Bioconductor.")
(license license:artistic2.0)))
(define-public r-genomicstate
(package
(name "r-genomicstate")
(version "0.99.15")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "GenomicState" version
'annotation))
(sha256
(base32 "1r7z3n6wyrd2cclj5b7sg15wpmjdh9k5b1hjlw7jjx8j384l7l1h"))))
(properties `((upstream-name . "GenomicState")))
(build-system r-build-system)
(propagated-inputs (list r-annotationdbi
r-annotationhub
r-bumphunter
r-derfinder
r-genomeinfodb
r-genomicfeatures
r-iranges
r-org-hs-eg-db
r-rtracklayer))
(native-inputs (list r-knitr))
(home-page "https://github.com/LieberInstitute/GenomicState")
(synopsis "Build and access GenomicState objects")
(description
"This package contains functions for building @code{GenomicState} objects
from different annotation sources such as Gencode. It also provides access to
these files at JHPCE.")
(license license:artistic2.0)))
(define-public r-atacseqqc
(package
(name "r-atacseqqc")