gnu: Add r-genomicstate.
* gnu/packages/bioconductor.scm (r-genomicstate): New variable. Change-Id: I1b86c8e849af7b69b5fa9ea2a0e43b4e3e1850b2master
parent
4e706e6b18
commit
6f93502ced
|
@ -16289,6 +16289,37 @@ type and symbol colors.")
|
||||||
position-specific scores within R and Bioconductor.")
|
position-specific scores within R and Bioconductor.")
|
||||||
(license license:artistic2.0)))
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
|
(define-public r-genomicstate
|
||||||
|
(package
|
||||||
|
(name "r-genomicstate")
|
||||||
|
(version "0.99.15")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "GenomicState" version
|
||||||
|
'annotation))
|
||||||
|
(sha256
|
||||||
|
(base32 "1r7z3n6wyrd2cclj5b7sg15wpmjdh9k5b1hjlw7jjx8j384l7l1h"))))
|
||||||
|
(properties `((upstream-name . "GenomicState")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs (list r-annotationdbi
|
||||||
|
r-annotationhub
|
||||||
|
r-bumphunter
|
||||||
|
r-derfinder
|
||||||
|
r-genomeinfodb
|
||||||
|
r-genomicfeatures
|
||||||
|
r-iranges
|
||||||
|
r-org-hs-eg-db
|
||||||
|
r-rtracklayer))
|
||||||
|
(native-inputs (list r-knitr))
|
||||||
|
(home-page "https://github.com/LieberInstitute/GenomicState")
|
||||||
|
(synopsis "Build and access GenomicState objects")
|
||||||
|
(description
|
||||||
|
"This package contains functions for building @code{GenomicState} objects
|
||||||
|
from different annotation sources such as Gencode. It also provides access to
|
||||||
|
these files at JHPCE.")
|
||||||
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
(define-public r-atacseqqc
|
(define-public r-atacseqqc
|
||||||
(package
|
(package
|
||||||
(name "r-atacseqqc")
|
(name "r-atacseqqc")
|
||||||
|
|
Reference in New Issue