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gnu: Add r-mbkmeans.

* gnu/packages/bioconductor.scm (r-mbkmeans): New variable.
master
Roel Janssen 2021-05-26 23:49:28 +02:00
parent ad827f5bc1
commit 700b10f181
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@ -3075,6 +3075,38 @@ package comprehensively addressing issues ranging from post-alignments
processing to visualization and annotation.") processing to visualization and annotation.")
(license license:gpl2))) (license license:gpl2)))
(define-public r-mbkmeans
(package
(name "r-mbkmeans")
(version "1.6.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "mbkmeans" version))
(sha256
(base32
"0rc83mh9xzwczfn88j0xah86ldzi1kdfqgd938nj57ifx3zci4xh"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr)))
(propagated-inputs
`(("r-delayedarray" ,r-delayedarray)
("r-rcpp" ,r-rcpp)
("r-s4vectors" ,r-s4vectors)
("r-singlecellexperiment" ,r-singlecellexperiment)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-clusterr" ,r-clusterr)
("r-benchmarkme" ,r-benchmarkme)
("r-matrix" ,r-matrix)
("r-bluster" ,r-bluster)
("r-beachmat" ,r-beachmat)
("r-rhdf5lib" ,r-rhdf5lib)
("r-biocparallel" ,r-biocparallel)))
(home-page "https://bioconductor.org/packages/mbkmeans")
(synopsis "Mini-batch k-means clustering for single-cell RNA-seq")
(description "This package implements the mini-batch k-means algorithm for
large datasets, including support for on-disk data representation.")
(license license:expat)))
(define-public r-multtest (define-public r-multtest
(package (package
(name "r-multtest") (name "r-multtest")