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gnu: r-annotate: Move to bioconductor. 

* gnu/packages/bioinformatics.scm (r-annotate): Move from here...
* gnu/packages/bioconductor.scm (r-annotate): ...to here.
master
Ricardo Wurmus 2019-01-13 12:55:46 +01:00
parent c80fb90f4a
commit 7097c7009d
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2 changed files with 28 additions and 28 deletions
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29
gnu/packages/bioconductor.scm
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@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2018 Roel Janssen <roel@gnu.org>
;;; Copyright © 2017, 2018 Roel Janssen <roel@gnu.org>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
@ -228,6 +228,33 @@ database is exposed as a @code{TxDb} object.")
(license license:artistic2.0)))
(define-public r-annotate
(package
(name "r-annotate")
(version "1.60.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "annotate" version))
(sha256
(base32
"0p6c96lay23a67dyirgnwzm2yw22m592z780vy6p4nqwla8ha18n"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-dbi" ,r-dbi)
("r-rcurl" ,r-rcurl)
("r-xml" ,r-xml)
("r-xtable" ,r-xtable)))
(home-page
"https://bioconductor.org/packages/annotate")
(synopsis "Annotation for microarrays")
(description "This package provides R environments for the annotation of
microarrays.")
(license license:artistic2.0)))
(define-public r-hpar
(package
(name "r-hpar")

27
gnu/packages/bioinformatics.scm
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@ -6338,33 +6338,6 @@ between two different types of motif instances using as much relevant
information as possible.")
(license (list license:gpl2+ license:gpl3+))))
(define-public r-annotate
(package
(name "r-annotate")
(version "1.60.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "annotate" version))
(sha256
(base32
"0p6c96lay23a67dyirgnwzm2yw22m592z780vy6p4nqwla8ha18n"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-dbi" ,r-dbi)
("r-rcurl" ,r-rcurl)
("r-xml" ,r-xml)
("r-xtable" ,r-xtable)))
(home-page
"https://bioconductor.org/packages/annotate")
(synopsis "Annotation for microarrays")
(description "This package provides R environments for the annotation of
microarrays.")
(license license:artistic2.0)))
(define-public r-copynumber
(package
(name "r-copynumber")