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gnu: Update bedtools to 2.30.0. 

* gnu/packages/bioinformatics.scm (bedtools): Update to 2.30.0,
  [inputs]: Use latest samtools.
master
Roel Janssen 2021-04-16 11:52:16 +02:00
parent 558d11c3a8
commit 7540f6915c
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1 changed files with 3 additions and 3 deletions
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gnu/packages/bioinformatics.scm
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@ -455,7 +455,7 @@ computational cluster.")
(define-public bedtools (define-public bedtools
(package (package
(name "bedtools") (name "bedtools")
(version "2.29.2") (version "2.30.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/arq5x/bedtools2/releases/" (uri (string-append "https://github.com/arq5x/bedtools2/releases/"
@ -463,7 +463,7 @@ computational cluster.")
"bedtools-" version ".tar.gz")) "bedtools-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"0m3hk6548846w83a9s5drsczvy67n2azx41kj71n03klb2gbzwg3")))) "1f2hh79l7dn147c2xyfgf5wfjvlqfw32kjfnnh2n1qy6rpzx2fik"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
'(#:test-target "test" '(#:test-target "test"
@ -475,7 +475,7 @@ computational cluster.")
(native-inputs (native-inputs
`(("python" ,python-wrapper))) `(("python" ,python-wrapper)))
(inputs (inputs
`(("samtools" ,samtools-1.9) `(("samtools" ,samtools)
("zlib" ,zlib))) ("zlib" ,zlib)))
(home-page "https://github.com/arq5x/bedtools2") (home-page "https://github.com/arq5x/bedtools2")
(synopsis "Tools for genome analysis and arithmetic") (synopsis "Tools for genome analysis and arithmetic")