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gnu: r-hdf5array: Update to 1.20.0.

* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.20.0.
[arguments]: Remove.
[propagated-inputs]: Add r-rhdf5filters.
master
Ricardo Wurmus 2021-06-05 08:33:38 +02:00
parent bfa23ec526
commit 75817956c1
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GPG Key ID: 197A5888235FACAC
1 changed files with 3 additions and 13 deletions

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@ -12140,27 +12140,16 @@ provided.")
(define-public r-hdf5array (define-public r-hdf5array
(package (package
(name "r-hdf5array") (name "r-hdf5array")
(version "1.18.1") (version "1.20.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "HDF5Array" version)) (uri (bioconductor-uri "HDF5Array" version))
(sha256 (sha256
(base32 (base32
"14v2adhwi0yac834g23kvfid740raclhmribzd28k10gsjk9cj7g")))) "1718hplz5qlbwxwb87509bl7lir9kilvn1s7p2haz551pg48zvrc"))))
(properties `((upstream-name . "HDF5Array"))) (properties `((upstream-name . "HDF5Array")))
(build-system r-build-system) (build-system r-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-linking
(lambda _
(substitute* "src/Makevars"
;; This is to avoid having a plain directory on the list of
;; libraries to link.
(("\\(RHDF5LIB_LIBS\\)" match)
(string-append match "/libhdf5.a")))
#t)))))
(inputs (inputs
`(("zlib" ,zlib))) `(("zlib" ,zlib)))
(propagated-inputs (propagated-inputs
@ -12169,6 +12158,7 @@ provided.")
("r-iranges" ,r-iranges) ("r-iranges" ,r-iranges)
("r-matrix" ,r-matrix) ("r-matrix" ,r-matrix)
("r-rhdf5" ,r-rhdf5) ("r-rhdf5" ,r-rhdf5)
("r-rhdf5filters" ,r-rhdf5filters)
("r-rhdf5lib" ,r-rhdf5lib) ("r-rhdf5lib" ,r-rhdf5lib)
("r-s4vectors" ,r-s4vectors))) ("r-s4vectors" ,r-s4vectors)))
(home-page "https://bioconductor.org/packages/HDF5Array") (home-page "https://bioconductor.org/packages/HDF5Array")