gnu: r-mzid: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-mzid): Move from here... * gnu/packages/bioconductor.scm (r-mzid): ...to here.
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2 changed files with 31 additions and 31 deletions
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@ -2731,6 +2731,37 @@ contains a number of utilities to explore the MS/MS results and assess missed
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and irregular enzymatic cleavages, mass measurement accuracy, etc.")
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and irregular enzymatic cleavages, mass measurement accuracy, etc.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-mzid
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(package
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(name "r-mzid")
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(version "1.28.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "mzID" version))
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(sha256
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(base32
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"0s7d6cz1li7v3ni6n6hrdspl93yiyr283kmbbd3hhkfgzgx6kpq2"))))
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(properties `((upstream-name . "mzID")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-doparallel" ,r-doparallel)
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("r-foreach" ,r-foreach)
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("r-iterators" ,r-iterators)
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("r-plyr" ,r-plyr)
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("r-protgenerics" ,r-protgenerics)
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("r-xml" ,r-xml)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/mzID")
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(synopsis "Parser for mzIdentML files")
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(description
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"This package provides a parser for mzIdentML files implemented using the
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XML package. The parser tries to be general and able to handle all types of
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mzIdentML files with the drawback of having less pretty output than a vendor
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specific parser.")
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(license license:gpl2+)))
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(define-public r-pcamethods
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(define-public r-pcamethods
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(package
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(package
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(name "r-pcamethods")
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(name "r-pcamethods")
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@ -9196,37 +9196,6 @@ their variance is independent of the mean, and they are usually more sensitive
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and specific in detecting differential transcription.")
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and specific in detecting differential transcription.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-mzid
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(package
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(name "r-mzid")
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(version "1.28.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "mzID" version))
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(sha256
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(base32
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"0s7d6cz1li7v3ni6n6hrdspl93yiyr283kmbbd3hhkfgzgx6kpq2"))))
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(properties `((upstream-name . "mzID")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-doparallel" ,r-doparallel)
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("r-foreach" ,r-foreach)
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("r-iterators" ,r-iterators)
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("r-plyr" ,r-plyr)
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("r-protgenerics" ,r-protgenerics)
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("r-xml" ,r-xml)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/mzID")
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(synopsis "Parser for mzIdentML files")
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(description
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"This package provides a parser for mzIdentML files implemented using the
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XML package. The parser tries to be general and able to handle all types of
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mzIdentML files with the drawback of having less pretty output than a vendor
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specific parser.")
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(license license:gpl2+)))
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(define-public r-aroma-light
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(define-public r-aroma-light
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(package
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(package
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(name "r-aroma-light")
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(name "r-aroma-light")
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