gnu: freebayes: Extend test timeout on slower architectures.
* gnu/packages/bioinformatics.scm (freebayes)[arguments]: Use custom 'check phase on aarch64-linux and armhf-linux to extend the test timeout.master
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@ -143,6 +143,7 @@
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#:use-module (gnu packages xml)
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#:use-module (gnu packages xorg)
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#:use-module (srfi srfi-1)
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#:use-module (srfi srfi-26)
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#:use-module (ice-9 match))
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(define-public aragorn
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@ -15168,7 +15169,16 @@ manipulations on VCF files.")
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(unpack "vcflib-src" "vcflib")
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(unpack "intervaltree-src" "vcflib/intervaltree")
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(unpack "test-simple-bash-src" "test/test-simple-bash"))
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#t))))))
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#t)))
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;; The slow tests take longer than the specified timeout.
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,@(if (any (cute string=? <> (%current-system))
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'("armhf-linux" "aarch64-linux"))
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'((replace 'check
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(lambda* (#:key tests? #:allow-other-keys)
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(when tests?
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(invoke "meson" "test" "--timeout-multiplier" "5"))
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#t)))
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'()))))
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(home-page "https://github.com/ekg/freebayes")
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(synopsis "Haplotype-based variant detector")
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(description "FreeBayes is a Bayesian genetic variant detector designed to
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