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gnu: methyldackel: Simplify arguments. 

* gnu/packages/bioinformatics.scm (methyldackel)[arguments]: Use list, drop
argument list.
[native-inputs]: Drop package label.
master
Ricardo Wurmus 2023-05-12 22:24:30 +02:00
parent 5d446e439d
commit 7a199bb74c
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GPG Key ID: 197A5888235FACAC
1 changed files with 10 additions and 9 deletions
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gnu/packages/bioinformatics.scm
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@ -17856,15 +17856,16 @@ patterns.")
"1sfhf2ap75qxpnmy1ifgmxqs18rq8mah9mcgkby73vc6h0sw99ws")))) "1sfhf2ap75qxpnmy1ifgmxqs18rq8mah9mcgkby73vc6h0sw99ws"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:test-target "test" (list
#:make-flags #:test-target "test"
,#~(list "CC=gcc" #:make-flags
"CFLAGS=-fcommon" #~(list "CC=gcc"
(string-append "prefix=" #$output "/bin/")) "CFLAGS=-fcommon"
#:phases (string-append "prefix=" #$output "/bin/"))
(modify-phases %standard-phases #:phases
'(modify-phases %standard-phases
(replace 'configure (replace 'configure
(lambda* (#:key outputs #:allow-other-keys) (lambda _
(substitute* "Makefile" (substitute* "Makefile"
(("-lhts ") "-lhts -lBigWig ") (("-lhts ") "-lhts -lBigWig ")
(("install MethylDackel \\$\\(prefix\\)" match) (("install MethylDackel \\$\\(prefix\\)" match)
@ -17874,7 +17875,7 @@ patterns.")
htslib-1.9 libbigwig zlib)) htslib-1.9 libbigwig zlib))
;; Needed for tests ;; Needed for tests
(native-inputs (native-inputs
`(("python" ,python-wrapper))) (list python-wrapper))
(home-page "https://github.com/dpryan79/MethylDackel") (home-page "https://github.com/dpryan79/MethylDackel")
(synopsis "Universal methylation extractor for BS-seq experiments") (synopsis "Universal methylation extractor for BS-seq experiments")
(description (description