gnu: methyldackel: Update to 0.6.1.
* gnu/packages/bioinformatics.scm (methyldackel): Update to 0.6.1. [arguments]: Set LIBBIGWIG variable instead of patching Makefile. [inputs]: Replace htslib-1.9 with htslib.
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		|  | @ -17844,7 +17844,7 @@ patterns.") | |||
| (define-public methyldackel | ||||
|   (package | ||||
|     (name "methyldackel") | ||||
|     (version "0.5.1") | ||||
|     (version "0.6.1") | ||||
|     (source (origin | ||||
|               (method git-fetch) | ||||
|               (uri (git-reference | ||||
|  | @ -17853,7 +17853,7 @@ patterns.") | |||
|               (file-name (git-file-name name version)) | ||||
|               (sha256 | ||||
|                (base32 | ||||
|                 "1sfhf2ap75qxpnmy1ifgmxqs18rq8mah9mcgkby73vc6h0sw99ws")))) | ||||
|                 "06kj76pyhzxfcjcpm840a3km3fa9994kfq4asglnb228pwak326z")))) | ||||
|     (build-system gnu-build-system) | ||||
|     (arguments | ||||
|      (list | ||||
|  | @ -17861,18 +17861,17 @@ patterns.") | |||
|       #:make-flags | ||||
|       #~(list "CC=gcc" | ||||
|               "CFLAGS=-fcommon" | ||||
|               "LIBBIGWIG=-lBigWig" | ||||
|               (string-append "prefix=" #$output "/bin/")) | ||||
|       #:phases | ||||
|       '(modify-phases %standard-phases | ||||
|          (replace 'configure | ||||
|            (lambda _ | ||||
|              (substitute* "Makefile" | ||||
|                (("-lhts ") "-lhts -lBigWig ") | ||||
|                (("install MethylDackel \\$\\(prefix\\)" match) | ||||
|                 (string-append "install -d $(prefix); " match)))))))) | ||||
|     (inputs | ||||
|      (list curl ; XXX: needed by libbigwig | ||||
|            htslib-1.9 libbigwig zlib)) | ||||
|      (list curl htslib libbigwig zlib)) | ||||
|     ;; Needed for tests | ||||
|     (native-inputs | ||||
|      (list python-wrapper)) | ||||
|  |  | |||
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