gnu: r-organismdbi: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-organismdbi): Move from here... * gnu/packages/bioconductor.scm (r-organismdbi): ...to here.
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2 changed files with 32 additions and 32 deletions
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@ -3145,6 +3145,38 @@ mzIdentML files with the drawback of having less pretty output than a vendor
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specific parser.")
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specific parser.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-organismdbi
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(package
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(name "r-organismdbi")
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(version "1.32.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "OrganismDbi" version))
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(sha256
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(base32
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"1mklnzs0d0ygcdibwfnk5xqr8ln6wpa00qcaw9c68m342kql0jqw"))))
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(properties `((upstream-name . "OrganismDbi")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)
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("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-biocmanager" ,r-biocmanager)
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("r-dbi" ,r-dbi)
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("r-genomicfeatures" ,r-genomicfeatures)
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("r-genomicranges" ,r-genomicranges)
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("r-graph" ,r-graph)
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("r-iranges" ,r-iranges)
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("r-rbgl" ,r-rbgl)
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("r-s4vectors" ,r-s4vectors)))
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(home-page "https://bioconductor.org/packages/OrganismDbi")
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(synopsis "Software to enable the smooth interfacing of database packages")
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(description "The package enables a simple unified interface to several
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annotation packages each of which has its own schema by taking advantage of
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the fact that each of these packages implements a select methods.")
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(license license:artistic2.0)))
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(define-public r-pcamethods
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(define-public r-pcamethods
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(package
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(package
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(name "r-pcamethods")
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(name "r-pcamethods")
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@ -9213,38 +9213,6 @@ chromosome region or transcript models of lincRNA genes.")
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;; No version specified
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;; No version specified
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(license license:lgpl3+)))
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(license license:lgpl3+)))
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(define-public r-organismdbi
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(package
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(name "r-organismdbi")
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(version "1.32.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "OrganismDbi" version))
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(sha256
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(base32
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"1mklnzs0d0ygcdibwfnk5xqr8ln6wpa00qcaw9c68m342kql0jqw"))))
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(properties `((upstream-name . "OrganismDbi")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)
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("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-biocmanager" ,r-biocmanager)
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("r-dbi" ,r-dbi)
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("r-genomicfeatures" ,r-genomicfeatures)
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("r-genomicranges" ,r-genomicranges)
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("r-graph" ,r-graph)
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("r-iranges" ,r-iranges)
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("r-rbgl" ,r-rbgl)
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("r-s4vectors" ,r-s4vectors)))
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(home-page "https://bioconductor.org/packages/OrganismDbi")
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(synopsis "Software to enable the smooth interfacing of database packages")
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(description "The package enables a simple unified interface to several
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annotation packages each of which has its own schema by taking advantage of
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the fact that each of these packages implements a select methods.")
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(license license:artistic2.0)))
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(define-public r-biovizbase
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(define-public r-biovizbase
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(package
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(package
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(name "r-biovizbase")
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(name "r-biovizbase")
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