gnu: Add python-pegasusio.
* gnu/packages/bioinformatics.scm (python-pegasusio): New variable.master
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@ -1138,6 +1138,37 @@ protocol. It provides a simple and reliable way to retrieve genomic data from
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servers supporting the protocol.")
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(license license:asl2.0)))
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(define-public python-pegasusio
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(package
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(name "python-pegasusio")
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(version "0.7.1")
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(source (origin
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(method url-fetch)
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(uri (pypi-uri "pegasusio" version))
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(sha256
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(base32
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"0gqygspdy398vjymdy6756jmk99s7fhwav9rivdx59kpqjcdxaz9"))))
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(build-system pyproject-build-system)
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(propagated-inputs
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(list python-anndata
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python-docopt
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python-h5py
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python-importlib-metadata
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python-loompy
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python-natsort
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python-numpy
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python-pandas
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python-pillow
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python-scipy
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python-zarr))
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(native-inputs (list python-cython python-setuptools-scm))
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(home-page "https://github.com/lilab-bcb/pegasusio")
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(synopsis "Read or write single-cell genomics data")
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(description
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"Pegasusio is a Python package for reading or writing single-cell
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genomics data.")
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(license license:bsd-3)))
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(define-public python-phylophlan
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(package
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(name "python-phylophlan")
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