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gnu: Add r-diffcyt.

* gnu/packages/bioconductor.scm (r-diffcyt): New variable.
zimoun 2022-03-08 20:06:17 +01:00 committed by Ricardo Wurmus
parent 69af58e9a1
commit 8a0713aef2
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@ -3004,6 +3004,44 @@ testing. The package also provides functions for the visualization and
exploration of the results.") exploration of the results.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public r-diffcyt
(package
(name "r-diffcyt")
(version "1.14.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "diffcyt" version))
(sha256
(base32 "1yc9mlc0ifb7h6rzskq97bsdq1kwdp5qq9l9mciwyxf6yjkmv5ni"))))
(properties `((upstream-name . "diffcyt")))
(build-system r-build-system)
(propagated-inputs
(list r-circlize
r-complexheatmap
r-dplyr
r-edger
r-flowcore
r-flowsom
r-limma
r-lme4
r-magrittr
r-multcomp
r-reshape2
r-s4vectors
r-summarizedexperiment
r-tidyr))
(native-inputs (list r-knitr))
(home-page "https://github.com/lmweber/diffcyt")
(synopsis "Differential discovery in high-dimensional cytometry")
(description
"This package provides statistical methods for differential discovery
analyses in high-dimensional cytometry data (including flow cytometry, mass
cytometry or CyTOF, and oligonucleotide-tagged cytometry), based on a
combination of high-resolution clustering and empirical Bayes moderated tests
adapted from transcriptomics.")
(license license:expat)))
(define-public r-dirichletmultinomial (define-public r-dirichletmultinomial
(package (package
(name "r-dirichletmultinomial") (name "r-dirichletmultinomial")