gnu: Add r-diffcyt.
* gnu/packages/bioconductor.scm (r-diffcyt): New variable.
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@ -3004,6 +3004,44 @@ testing. The package also provides functions for the visualization and
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exploration of the results.")
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(license license:gpl3+)))
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(define-public r-diffcyt
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(package
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(name "r-diffcyt")
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(version "1.14.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "diffcyt" version))
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(sha256
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(base32 "1yc9mlc0ifb7h6rzskq97bsdq1kwdp5qq9l9mciwyxf6yjkmv5ni"))))
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(properties `((upstream-name . "diffcyt")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-circlize
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r-complexheatmap
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r-dplyr
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r-edger
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r-flowcore
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r-flowsom
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r-limma
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r-lme4
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r-magrittr
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r-multcomp
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r-reshape2
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r-s4vectors
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r-summarizedexperiment
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r-tidyr))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/lmweber/diffcyt")
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(synopsis "Differential discovery in high-dimensional cytometry")
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(description
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"This package provides statistical methods for differential discovery
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analyses in high-dimensional cytometry data (including flow cytometry, mass
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cytometry or CyTOF, and oligonucleotide-tagged cytometry), based on a
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combination of high-resolution clustering and empirical Bayes moderated tests
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adapted from transcriptomics.")
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(license license:expat)))
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(define-public r-dirichletmultinomial
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(package
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(name "r-dirichletmultinomial")
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