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gnu: python-pandas: Build and run tests in parallel. 

* gnu/packages/python-science.scm (python-pandas)
[phases]{enable-parallel-build}: New phase.
{check}: Add xdist -n option.  Skip test_memory_usage test.
[native-inputs]: Add python-pytest-xdist.
master
Maxim Cournoyer 2022-04-18 15:27:38 -04:00
parent feee911366
commit 8b390a8750
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GPG Key ID: 1260E46482E63562
1 changed files with 13 additions and 1 deletions
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@ -413,6 +413,12 @@ library.")
(srfi srfi-26)) (srfi srfi-26))
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'unpack 'enable-parallel-build
(lambda _
(substitute* "setup.py"
(("\"-j\", type=int, default=1")
(format #f "\"-j\", type=int, default=~a"
(parallel-job-count))))))
(add-after 'unpack 'patch-which (add-after 'unpack 'patch-which
(lambda* (#:key inputs #:allow-other-keys) (lambda* (#:key inputs #:allow-other-keys)
(let ((which (assoc-ref inputs "which"))) (let ((which (assoc-ref inputs "which")))
@ -439,6 +445,7 @@ library.")
(when tests? (when tests?
(invoke "pytest" "-vv" "pandas" "--skip-slow" (invoke "pytest" "-vv" "pandas" "--skip-slow"
"--skip-network" "--skip-network"
"-n" (number->string (parallel-job-count))
"-k" "-k"
(string-append (string-append
;; These test access the internet (see: ;; These test access the internet (see:
@ -448,7 +455,11 @@ library.")
"not test_wrong_url" "not test_wrong_url"
;; TODO: Missing input ;; TODO: Missing input
" and not TestS3" " and not TestS3"
" and not s3")))))))))) " and not s3"
;; This test fails when run with pytest-xdist
;; (see:
;; https://github.com/pandas-dev/pandas/issues/39096).
" and not test_memory_usage"))))))))))
(propagated-inputs (propagated-inputs
(list python-jinja2 (list python-jinja2
python-numpy python-numpy
@ -466,6 +477,7 @@ library.")
python-html5lib python-html5lib
python-pytest python-pytest
python-pytest-mock python-pytest-mock
python-pytest-xdist
;; Needed to test clipboard support. ;; Needed to test clipboard support.
xorg-server-for-tests)) xorg-server-for-tests))
(home-page "https://pandas.pydata.org") (home-page "https://pandas.pydata.org")