gnu: Add r-genomicfiles.
* gnu/packages/bioinformatics.scm (r-genomicfiles): New variable.master
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@ -9483,6 +9483,39 @@ pathways and GO terms. These funtions and data are also useful for gene set
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analysis using other methods.")
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analysis using other methods.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-genomicfiles
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(package
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(name "r-genomicfiles")
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(version "1.14.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "GenomicFiles" version))
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(sha256
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(base32
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"0r0wmrs5jycf1kckhnc2sgjmp336srlcjdkpbb1ymm7kazdd0s9n"))))
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(properties `((upstream-name . "GenomicFiles")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-biocparallel" ,r-biocparallel)
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("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicalignments" ,r-genomicalignments)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-rsamtools" ,r-rsamtools)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)
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("r-summarizedexperiment" ,r-summarizedexperiment)
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("r-variantannotation" ,r-variantannotation)))
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(home-page "https://bioconductor.org/packages/GenomicFiles")
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(synopsis "Distributed computing by file or by range")
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(description
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"This package provides infrastructure for parallel computations
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distributed by file or by range. User defined mapper and reducer functions
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provide added flexibility for data combination and manipulation.")
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(license license:artistic2.0)))
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(define-public r-qvalue
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(define-public r-qvalue
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(package
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(package
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(name "r-qvalue")
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(name "r-qvalue")
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