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gnu: salmon: Update to 1.10.1.

* gnu/packages/bioinformatics.scm (salmon): Update to 1.10.1.
[inputs]: Replace cereal-1.3.0 with cereal; add htscodecs.
[native-inputs]: Update hash of pufferfish sources.
master
Ricardo Wurmus 2023-04-24 18:52:08 +02:00
parent b8a0a10308
commit 913668e879
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 5 additions and 4 deletions

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@ -12020,7 +12020,7 @@ The following file formats are supported:
(define-public salmon
(package
(name "salmon")
(version "1.9.0")
(version "1.10.1")
(source (origin
(method git-fetch)
(uri (git-reference
@ -12029,7 +12029,7 @@ The following file formats are supported:
(file-name (git-file-name name version))
(sha256
(base32
"1370ry3jpj05gplzyny44mqg77a29a6gp8ijmjz135d2igf956r8"))
"0grpcajxf2bch4b74zb66pdssda8yc7jvxj5ckaw0xvw1605rpcj"))
(modules '((guix build utils)))
(snippet
;; Delete bundled headers for eigen3.
@ -12124,9 +12124,10 @@ The following file formats are supported:
(inputs
(list boost
bzip2
cereal-1.3.0
cereal
curl
eigen
htscodecs
jemalloc
libgff
tbb
@ -12143,7 +12144,7 @@ The following file formats are supported:
(file-name (git-file-name "pufferfish" version))
(sha256
(base32
"048a006mc2d0h78ym58mv67hl1pj480ilc5ifq0rlzfdyyfs1b8i"))))))
"0fcv5rd2k4fabsg489sjfxgjisivhwk1w26gfc88rgpszdkcla36"))))))
(home-page "https://github.com/COMBINE-lab/salmon")
(synopsis "Quantification from RNA-seq reads using lightweight alignments")
(description "Salmon is a program to produce highly-accurate,