From 9535cee6cdf259f898fae043564038f53a809a9e Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?M=C4=83d=C4=83lin=20Ionel=20Patra=C8=99cu?= Date: Thu, 30 Nov 2023 13:20:05 +0100 Subject: [PATCH] gnu: Add r-polyester. * gnu/packages/bioconductor.scm (r-polyester): New variable. Change-Id: I415089cda3214ec04402fc6f4505fa868414d0e2 Signed-off-by: Ricardo Wurmus --- gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 7ff364ee55..4f15213481 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9592,6 +9592,34 @@ package contains functions for combining the results of multiple runs of gene set analyses.") (license license:gpl2+))) +(define-public r-polyester + (package + (name "r-polyester") + (version "1.38.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "polyester" version)) + (sha256 + (base32 "1iycdxj0jhh2faclfzflp2cjc2zmxmhy03avv75h0qg3j5kf35l4")))) + (properties `((upstream-name . "polyester"))) + (build-system r-build-system) + (propagated-inputs + (list r-biostrings + r-iranges + r-limma + r-logspline + r-s4vectors + r-zlibbioc)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/polyester") + (synopsis "Simulate RNA-seq reads") + (description + "The polyester package simulates RNA-seq reads from differential expression +experiments with replicates. The reads can then be aligned and used to perform +comparisons of methods for differential expression.") + (license license:artistic2.0))) + (define-public r-powertcr (package (name "r-powertcr")