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gnu: snakemake-5: Patch version string.

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* gnu/packages/python-xyz.scm (snakemake-5)[arguments]: Add phase
'patch-version.

Change-Id: I647625e9d26b2ee06274a0c5bb844ccb87035537
This commit is contained in:
Ricardo Wurmus 2024-05-02 21:45:49 +02:00
parent 8d14b1cbb6
commit 9692e2bb7c
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1 changed files with 8 additions and 0 deletions
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gnu/packages/python-xyz.scm
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@ -13227,6 +13227,14 @@ approach.")
(substitute* "snakemake/dag.py" (substitute* "snakemake/dag.py"
(("\"job\": rule,") (("\"job\": rule,")
"\"job\": rule.name,")))) "\"job\": rule.name,"))))
(add-after 'unpack 'patch-version
(lambda _
(substitute* "setup.py"
(("version=versioneer.get_version\\(\\)")
(format #f "version=~s" #$version)))
(substitute* '("snakemake/_version.py"
"versioneer.py")
(("0\\+unknown") #$version))))
;; For cluster execution Snakemake will call Python. Since there is ;; For cluster execution Snakemake will call Python. Since there is
;; no suitable PYTHONPATH set, cluster execution will fail. We fix ;; no suitable PYTHONPATH set, cluster execution will fail. We fix
;; this by calling the snakemake wrapper instead. ;; this by calling the snakemake wrapper instead.