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gnu: r-gkmsvm: Update to 0.80.0. 

* gnu/packages/bioconductor.scm (r-gkmsvm): Update to 0.80.0.
[propagated-inputs]: Remove r-biocgenerics, r-biostrings, r-genomeinfodb,
r-iranges, r-rtracklayer, and r-s4vectors.
master
Ricardo Wurmus 2020-03-01 19:14:07 +01:00
parent d4388c0bf6
commit 975cfe26e1
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GPG Key ID: 197A5888235FACAC
1 changed files with 3 additions and 10 deletions
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gnu/packages/bioconductor.scm
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@ -3221,27 +3221,20 @@ surface of a flowcell.")
(define-public r-gkmsvm (define-public r-gkmsvm
(package (package
(name "r-gkmsvm") (name "r-gkmsvm")
(version "0.79.0") (version "0.80.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "gkmSVM" version)) (uri (cran-uri "gkmSVM" version))
(sha256 (sha256
(base32 (base32
"04dakbgfvfalz4rm4fvvybp506dn5fbj5g86ybfhrc6wywjllsz3")))) "0ljcga246ad0ql8x3drvrdsyp0f20mgp3p6lnl79xb76qgfdnm0p"))))
(properties `((upstream-name . "gkmSVM"))) (properties `((upstream-name . "gkmSVM")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics) `(("r-kernlab" ,r-kernlab)
("r-biostrings" ,r-biostrings)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-kernlab" ,r-kernlab)
("r-rcpp" ,r-rcpp) ("r-rcpp" ,r-rcpp)
("r-rocr" ,r-rocr) ("r-rocr" ,r-rocr)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-seqinr" ,r-seqinr))) ("r-seqinr" ,r-seqinr)))
(home-page "https://cran.r-project.org/web/packages/gkmSVM") (home-page "https://cran.r-project.org/web/packages/gkmSVM")
(synopsis "Gapped-kmer support vector machine") (synopsis "Gapped-kmer support vector machine")