gnu: Add discrover.
* gnu/packages/bioinformatics.scm (discrover): New variable.
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@ -51,7 +51,9 @@
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#:use-module (gnu packages gawk)
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#:use-module (gnu packages gawk)
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#:use-module (gnu packages gcc)
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#:use-module (gnu packages gcc)
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#:use-module (gnu packages gd)
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#:use-module (gnu packages gd)
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#:use-module (gnu packages gtk)
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#:use-module (gnu packages image)
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#:use-module (gnu packages image)
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#:use-module (gnu packages imagemagick)
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#:use-module (gnu packages java)
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#:use-module (gnu packages java)
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#:use-module (gnu packages linux)
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#:use-module (gnu packages linux)
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#:use-module (gnu packages logging)
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#:use-module (gnu packages logging)
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@ -70,6 +72,7 @@
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#:use-module (gnu packages ruby)
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#:use-module (gnu packages ruby)
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#:use-module (gnu packages statistics)
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#:use-module (gnu packages statistics)
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#:use-module (gnu packages tbb)
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#:use-module (gnu packages tbb)
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#:use-module (gnu packages tex)
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#:use-module (gnu packages textutils)
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#:use-module (gnu packages textutils)
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#:use-module (gnu packages time)
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#:use-module (gnu packages time)
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#:use-module (gnu packages tls)
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#:use-module (gnu packages tls)
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@ -1603,6 +1606,33 @@ data and settings.")
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(license (license:non-copyleft "file://src/COPYING"
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(license (license:non-copyleft "file://src/COPYING"
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"See src/COPYING in the distribution."))))
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"See src/COPYING in the distribution."))))
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(define-public discrover
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(package
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(name "discrover")
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(version "1.6.0")
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(source
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(origin
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(method url-fetch)
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(uri (string-append "https://github.com/maaskola/discrover/archive/"
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version ".tar.gz"))
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(file-name (string-append name "-" version ".tar.gz"))
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(sha256
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(base32
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"0rah9ja4m0rl5mldd6vag9rwrivw1zrqxssfq8qx64m7961fp68k"))))
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(build-system cmake-build-system)
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(arguments `(#:tests? #f)) ; there are no tests
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(inputs
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`(("boost" ,boost)
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("cairo" ,cairo)))
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(native-inputs
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`(("texlive" ,texlive)
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("imagemagick" ,imagemagick)))
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(home-page "http://dorina.mdc-berlin.de/public/rajewsky/discrover/")
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(synopsis "Discover discriminative nucleotide sequence motifs")
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(description "Discrover is a motif discovery method to find binding sites
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of nucleic acid binding proteins.")
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(license license:gpl3+)))
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(define-public eigensoft
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(define-public eigensoft
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(let ((revision "1")
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(let ((revision "1")
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(commit "b14d1e202e21e532536ff8004f0419cd5e259dc7"))
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(commit "b14d1e202e21e532536ff8004f0419cd5e259dc7"))
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