gnu: Add ruby-bio-vcf.
* gnu/packages/bioinformatics.scm (ruby-bio-vcf): New variable.
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@ -7726,6 +7726,31 @@ BLAST, KEGG, GenBank, MEDLINE and GO.")
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;; (LGPLv2.1+) and scripts in samples (which have GPL2 and GPL2+)
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;; (LGPLv2.1+) and scripts in samples (which have GPL2 and GPL2+)
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(license (list license:ruby license:lgpl2.1+ license:gpl2+ ))))
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(license (list license:ruby license:lgpl2.1+ license:gpl2+ ))))
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(define-public ruby-bio-vcf
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(package
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(name "ruby-bio-vcf")
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(version "0.9.5")
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(source
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(origin
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(method url-fetch)
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(uri (rubygems-uri "bio-vcf" version))
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(sha256
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(base32
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"1glw5pn9s8z13spxk6yyfqaz80n9lga67f33w35nkpq9dwi2vg6g"))))
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(build-system ruby-build-system)
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(native-inputs
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`(("ruby-cucumber" ,ruby-cucumber)))
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(synopsis "Smart VCF parser DSL")
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(description
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"Bio-vcf provides a @acronym{DSL, domain specific language} for processing
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the VCF format. Record named fields can be queried with regular expressions.
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Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not
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only very fast for genome-wide (WGS) data, it also comes with a filtering,
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evaluation and rewrite language and can output any type of textual data,
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including VCF header and contents in RDF and JSON.")
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(home-page "https://github.com/vcflib/bio-vcf")
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(license license:expat)))
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(define-public r-biocviews
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(define-public r-biocviews
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(package
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(package
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(name "r-biocviews")
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(name "r-biocviews")
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