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@ -13827,6 +13827,40 @@ intergenic sequences. These sequences are generated based on expression of
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all RNA-Seq libraries of each species integrated in Bgee.")
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(license license:gpl3)))
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(define-public r-bgeedb
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(package
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(name "r-bgeedb")
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(version "2.18.1")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "BgeeDB" version))
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(sha256
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(base32
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"1ziq180yfpdqwhjdzkwjjhwzn3kb0gkj6q0a26c7a30mcfb50w11"))))
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(properties `((upstream-name . "BgeeDB")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-curl" ,r-curl)
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("r-data-table" ,r-data-table)
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("r-digest" ,r-digest)
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("r-dplyr" ,r-dplyr)
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("r-graph" ,r-graph)
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("r-r-utils" ,r-r-utils)
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("r-rcurl" ,r-rcurl)
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("r-rsqlite" ,r-rsqlite)
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("r-tidyr" ,r-tidyr)
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("r-topgo" ,r-topgo)))
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(native-inputs `(("r-knitr" ,r-knitr)))
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(home-page "https://github.com/BgeeDB/BgeeDB_R")
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(synopsis "Annotation and gene expression data retrieval from Bgee database")
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(description
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"This package provides a package for the annotation and gene expression
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data download from Bgee database, and TopAnat analysis: GO-like enrichment of
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anatomical terms, mapped to genes by expression patterns.")
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(license license:gpl3)))
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(define-public r-tximeta
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(package
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(name "r-tximeta")
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