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gnu: Add r-roar.

* gnu/packages/bioconductor.scm (r-roar): New variable.
master
Ricardo Wurmus 2019-03-29 22:41:58 +01:00
parent 98a2af31a8
commit a6e1eb1a96
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@ -3914,3 +3914,32 @@ normalization. YARN leverages many Bioconductor tools and statistical
techniques to account for the large heterogeneity and sparsity found in very techniques to account for the large heterogeneity and sparsity found in very
large RNA-seq experiments.") large RNA-seq experiments.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-roar
(package
(name "r-roar")
(version "1.18.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "roar" version))
(sha256
(base32
"15650s9vs7dvmqpvrs4xwn6j4kh14yqsx4daqyhhxxr68kn8mklw"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "https://github.com/vodkatad/roar/")
(synopsis "Identify differential APA usage from RNA-seq alignments")
(description
"This package provides tools for identifying preferential usage of APA
sites, comparing two biological conditions, starting from known alternative
sites and alignments obtained from standard RNA-seq experiments.")
(license license:gpl3)))