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gnu: Add r-memes.

* gnu/packages/bioconductor.scm (r-memes): New variable.

Change-Id: Ibdf5173d35ef81d27da6831148e66be83f856deb
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
master
nafkhamdc 2024-05-03 09:19:33 +00:00 committed by Ricardo Wurmus
parent a4ad0a46ef
commit a710ebec1d
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@ -2092,6 +2092,54 @@ gene expression indicate a role for enhancer priming in immune response\", publi
in Nature Genetics, January 2018.")
(license license:gpl2+)))
;; This is available only in the devel branch of Bioconductor.
(define-public r-memes
(let ((commit "55f0df1fe65c8ead5252542fdc0da0ff2339049e")
(revision "1"))
(package
(name "r-memes")
(version (git-version "1.11.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/snystrom/memes")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0mp3a610v293prmyid3w1w8fkjkppjnim60h7p9vz2884d0wdvk4"))))
(properties `((upstream-name . "memes")))
(build-system r-build-system)
(propagated-inputs (list r-biostrings
r-cmdfun
r-dplyr
r-genomicranges
r-ggplot2
r-ggseqlogo
r-magrittr
r-matrixstats
r-patchwork
r-processx
r-purrr
r-readr
r-rlang
r-tibble
r-tidyr
r-universalmotif
r-usethis
r-xml2))
(native-inputs (list r-knitr))
(home-page "https://github.com/snystrom/memes")
(synopsis
"Motif matching, comparison, and de novo discovery using the MEME Suite")
(description
"This package facilitates motif analysis using MEME Suite tools.
Memes provides data aware utilities for using GRanges objects as
entrypoints to motifanalysis, data structures for examining & editing
motif lists, and novel data visualizations. Memes functions and data
structures are amenable to both base R and tidyverse workflows.")
(license license:expat))))
(define-public r-methylclockdata
(package
(name "r-methylclockdata")