gnu: Add r-metaneighbor.
* gnu/packages/bioconductor.scm (r-metaneighbor): New variable.
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@ -6010,6 +6010,42 @@ reduction (between group analysis) and joint dimension reduction of two
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datasets (coinertia analysis).")
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datasets (coinertia analysis).")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-metaneighbor
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(package
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(name "r-metaneighbor")
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(version "1.18.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "MetaNeighbor" version))
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(sha256
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(base32
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"1gjjp5qlmv26sd3fvrd8cgv3invckxr8ldjpizpqm4mxjzifxwpm"))))
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(properties `((upstream-name . "MetaNeighbor")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-beanplot
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r-dplyr
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r-ggplot2
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r-gplots
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r-igraph
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r-matrix
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r-matrixstats
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r-rcolorbrewer
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r-singlecellexperiment
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r-summarizedexperiment
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r-tibble
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r-tidyr))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/MetaNeighbor")
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(synopsis "Single cell replicability analysis")
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(description
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"This package implements a method to rapidly assess cell type identity using
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both functional and random gene sets and it allows users to quantify cell type
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replicability across datasets using neighbor voting. @code{MetaNeighbor} works
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on the basis that cells of the same type should have more similar gene expression
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profiles than cells of different types.")
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(license license:expat)))
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(define-public r-methylkit
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(define-public r-methylkit
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(package
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(package
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(name "r-methylkit")
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(name "r-methylkit")
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