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gnu: Add python-vireosnp.

* gnu/packages/bioinformatics.scm (python-vireosnp): New variable.
Simon Tournier 2023-01-17 18:30:38 +01:00 committed by Ricardo Wurmus
parent 0d169401cb
commit a7f1a1c0f0
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@ -17604,6 +17604,28 @@ interest.")
;; Any version of the GPL
(license license:gpl3+))))
(define-public python-vireosnp
(package
(name "python-vireosnp")
(version "0.5.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "vireoSNP" version))
(sha256
(base32
"02ybhzivsxwnb1axlgbs63wni1j27xajnkl4jw1ps5vmsz2l4b0d"))))
(build-system python-build-system)
(propagated-inputs (list python-matplotlib python-numpy python-scipy))
(home-page "https://github.com/huangyh09/vireoSNP")
(synopsis "Deconvolution based on SNP for multiplexed scRNA-seq data")
(description
"This package provides a deconvolution based on Single Nucleotide
Position (SNP) for multiplexed scRNA-seq data. The name vireo stand for
Variational Inference for Reconstructing Ensemble Origin by expressed SNPs in
multiplexed scRNA-seq data and follows the clone identification from
single-cell data named @url{https://github.com/PMBio/cardelino, cardelino}.")
(license license:asl2.0)))
(define-public ccwl
(package
(name "ccwl")