gnu: Add python-vireosnp.
* gnu/packages/bioinformatics.scm (python-vireosnp): New variable.
parent
0d169401cb
commit
a7f1a1c0f0
|
@ -17604,6 +17604,28 @@ interest.")
|
|||
;; Any version of the GPL
|
||||
(license license:gpl3+))))
|
||||
|
||||
(define-public python-vireosnp
|
||||
(package
|
||||
(name "python-vireosnp")
|
||||
(version "0.5.7")
|
||||
(source (origin
|
||||
(method url-fetch)
|
||||
(uri (pypi-uri "vireoSNP" version))
|
||||
(sha256
|
||||
(base32
|
||||
"02ybhzivsxwnb1axlgbs63wni1j27xajnkl4jw1ps5vmsz2l4b0d"))))
|
||||
(build-system python-build-system)
|
||||
(propagated-inputs (list python-matplotlib python-numpy python-scipy))
|
||||
(home-page "https://github.com/huangyh09/vireoSNP")
|
||||
(synopsis "Deconvolution based on SNP for multiplexed scRNA-seq data")
|
||||
(description
|
||||
"This package provides a deconvolution based on Single Nucleotide
|
||||
Position (SNP) for multiplexed scRNA-seq data. The name vireo stand for
|
||||
Variational Inference for Reconstructing Ensemble Origin by expressed SNPs in
|
||||
multiplexed scRNA-seq data and follows the clone identification from
|
||||
single-cell data named @url{https://github.com/PMBio/cardelino, cardelino}.")
|
||||
(license license:asl2.0)))
|
||||
|
||||
(define-public ccwl
|
||||
(package
|
||||
(name "ccwl")
|
||||
|
|
Reference in New Issue