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gnu: Add python-mygene.

* gnu/packages/bioinformatics.scm (python-mygene): New variable.
master
Ricardo Wurmus 2021-12-02 11:57:28 +01:00
parent b15a525703
commit a8fff63daa
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1 changed files with 21 additions and 0 deletions

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@ -10340,6 +10340,27 @@ single-cell RNA-seq data.")
API services.")
(license license:bsd-3)))
(define-public python-mygene
(package
(name "python-mygene")
(version "3.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mygene" version))
(sha256
(base32 "1snszwdgfygchxshcbry3b5pbcw3g1isp8dw46razxccqaxwlag7"))))
(build-system python-build-system)
(propagated-inputs
`(("python-biothings-client" ,python-biothings-client)))
(home-page "https://github.com/biothings/mygene.py")
(synopsis "Python Client for MyGene.Info services.")
(description "MyGene.Info provides simple-to-use REST web services
to query/retrieve gene annotation data. It's designed with simplicity
and performance emphasized. Mygene is a Python wrapper to access
MyGene.Info services.")
(license license:bsd-3)))
;; We cannot use the latest commit because it requires Java 9.
(define-public java-forester
(let ((commit "86b07efe302d5094b42deed9260f719a4c4ac2e6")