From a9383428994dbe1b3266bfe020aba3c31e3a75f4 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 3 Nov 2023 18:51:35 +0100 Subject: [PATCH] gnu: r-rhdf5lib: Adjust modifications to Makevars. * gnu/packages/bioconductor.scm (r-rhdf5lib)[arguments]: Adjust patch. Change-Id: Iaef3d2d80c22de1c2a0b64e7c13f5fa3b8e5719d --- gnu/packages/bioconductor.scm | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 6020f313f9..18d24784b2 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -20569,8 +20569,6 @@ block processing.") (substitute* "Makevars" (("@BUILD_HDF5@") "") (("@COPY_SZIP@") "") - (("@ZLIB_LIB@") "-lz") - (("@ZLIB_INCLUDE@") "") (("HDF5_CXX_LIB=.*") (string-append "HDF5_CXX_LIB=" (assoc-ref inputs "hdf5") "/lib/libhdf5_cpp.a\n")) @@ -20587,6 +20585,9 @@ block processing.") (("HDF5_HL_CXX_LIB=.*") (string-append "HDF5_HL_CXX_LIB=" (assoc-ref inputs "hdf5") "/lib/libhdf5_hl_cpp.a\n")) + (("@ZLIB_LIB_PATH@") "-lz") + (("@ZLIB_INCLUDE_PATH@") "") + ;; szip is non-free software (("cp \"\\$\\{SZIP_LIB\\}.*") "") (("PKG_LIBS =.*") "PKG_LIBS = -lz -lhdf5\n"))))))))