parent
6d1cc311e5
commit
a969d91ca5
|
@ -4727,6 +4727,32 @@ makes available functions for visualization and exploration of the data and
|
||||||
results.")
|
results.")
|
||||||
(license license:gpl3+)))
|
(license license:gpl3+)))
|
||||||
|
|
||||||
|
(define-public r-dss
|
||||||
|
(package
|
||||||
|
(name "r-dss")
|
||||||
|
(version "2.46.0")
|
||||||
|
(source (origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "DSS" version))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"1qm0pq6495fn2zrbddaadb1w01ry76rg8mmbmxf3zws9pww48jgf"))))
|
||||||
|
(properties `((upstream-name . "DSS")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs (list r-biobase r-biocparallel r-bsseq))
|
||||||
|
(native-inputs (list r-knitr))
|
||||||
|
(home-page "https://bioconductor.org/packages/DSS")
|
||||||
|
(synopsis "Dispersion shrinkage for sequencing data")
|
||||||
|
(description
|
||||||
|
"DSS is an R library performing differential analysis for count-based
|
||||||
|
sequencing data. It detects @dfn{differentially expressed genes} (DEGs) from
|
||||||
|
RNA-seq, and differentially methylated loci or regions (DML/DMRs) from
|
||||||
|
@dfn{bisulfite sequencing} (BS-seq). The core of DSS is a dispersion
|
||||||
|
shrinkage method for estimating the dispersion parameter from Gamma-Poisson or
|
||||||
|
Beta-Binomial distributions.")
|
||||||
|
;; Any version of the GPL
|
||||||
|
(license (list license:gpl2+ license:gpl3+))))
|
||||||
|
|
||||||
(define-public r-bluster
|
(define-public r-bluster
|
||||||
(package
|
(package
|
||||||
(name "r-bluster")
|
(name "r-bluster")
|
||||||
|
|
Reference in New Issue