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gnu: Remove python2-biom-format. 

There are no users of this variant, and the current version of biom-format
does not support Python 2.

* gnu/packages/bioinformatics.scm (python2-biom-format): Remove variable.
(python-biom-format)[properties]: Remove field.
master
Ricardo Wurmus 2021-12-03 13:29:24 +01:00
parent 8fa7de386c
commit aa2d5ca02e
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1 changed files with 1 additions and 17 deletions
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gnu/packages/bioinformatics.scm
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@ -1094,23 +1094,7 @@ Python.")
representing counts of observations e.g. operational taxonomic units, KEGG representing counts of observations e.g. operational taxonomic units, KEGG
orthology groups or lipid types, in one or more biological samples orthology groups or lipid types, in one or more biological samples
e.g. microbiome samples, genomes, metagenomes.") e.g. microbiome samples, genomes, metagenomes.")
(license license:bsd-3) (license license:bsd-3)))
(properties `((python2-variant . ,(delay python2-biom-format))))))
(define-public python2-biom-format
(let ((base (package-with-python2 (strip-python2-variant python-biom-format))))
(package
(inherit base)
(arguments
(substitute-keyword-arguments (package-arguments base)
((#:phases phases)
`(modify-phases ,phases
;; Do not require the unmaintained pyqi library.
(add-after 'unpack 'remove-pyqi
(lambda _
(substitute* "setup.py"
(("install_requires.append\\(\"pyqi\"\\)") "pass"))
#t)))))))))
(define-public python-pairtools (define-public python-pairtools
(package (package