me
/
guix
Archived
1
0
Fork 0
Code

gnu: pigx-chipseq: Fix build. 

* gnu/packages/bioinformatics.scm (pigx-chipseq)[arguments]: Patch build
system.
master
Ricardo Wurmus 2022-05-29 00:18:48 +02:00
parent 66bfe55848
commit add551f651
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 9 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

9
gnu/packages/bioinformatics.scm
View File

@ -11094,6 +11094,15 @@ expression report comparing samples in an easily configurable manner.")
(modify-phases %standard-phases
(add-before 'bootstrap 'autoreconf
(lambda _
;; This was fixed in commit
;; 0b1c9f7f2e4d0ff601f1de95ab8b2953f4d5dbc7, but there is no
;; release with this fix.
(call-with-output-file "VERSION"
(lambda (port) (display ,version port)))
;; See https://github.com/BIMSBbioinfo/pigx_chipseq/issues/176
(substitute* "m4/ax_r_package.m4"
(("if\\(is.na\\(packageDescription\\(\"PKG\"\\)\\)\\)")
"if(system.file(package=\"PKG\") == \"\")"))
(invoke "autoreconf" "-vif")))
(add-before 'configure 'set-PYTHONPATH
(lambda _