gnu: r-biostrings: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-biostrings): Move from here... * gnu/packages/bioconductor.scm (r-biostrings): ...to here.
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2 changed files with 27 additions and 27 deletions
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@ -1686,6 +1686,33 @@ functions for parallel evaluation, tailored to use with Bioconductor
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objects.")
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objects.")
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(license (list license:gpl2+ license:gpl3+))))
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(license (list license:gpl2+ license:gpl3+))))
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(define-public r-biostrings
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(package
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(name "r-biostrings")
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(version "2.58.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "Biostrings" version))
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(sha256
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(base32
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"1rbqhs73mhfr1gi0rx28jiyan7i3hb45ai3jpl1656fnrhgjfxq5"))))
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(properties
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`((upstream-name . "Biostrings")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-crayon" ,r-crayon)
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("r-iranges" ,r-iranges)
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("r-s4vectors" ,r-s4vectors)
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("r-xvector" ,r-xvector)))
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(home-page "https://bioconductor.org/packages/Biostrings")
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(synopsis "String objects and algorithms for biological sequences")
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(description
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"This package provides memory efficient string containers, string
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matching algorithms, and other utilities, for fast manipulation of large
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biological sequences or sets of sequences.")
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(license license:artistic2.0)))
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(define-public r-category
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(define-public r-category
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(package
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(package
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(name "r-category")
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(name "r-category")
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@ -7691,33 +7691,6 @@ including VCF header and contents in RDF and JSON.")
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(home-page "https://github.com/vcflib/bio-vcf")
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(home-page "https://github.com/vcflib/bio-vcf")
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(license license:expat)))
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(license license:expat)))
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(define-public r-biostrings
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(package
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(name "r-biostrings")
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(version "2.58.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "Biostrings" version))
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(sha256
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(base32
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"1rbqhs73mhfr1gi0rx28jiyan7i3hb45ai3jpl1656fnrhgjfxq5"))))
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(properties
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`((upstream-name . "Biostrings")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-crayon" ,r-crayon)
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("r-iranges" ,r-iranges)
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("r-s4vectors" ,r-s4vectors)
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("r-xvector" ,r-xvector)))
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(home-page "https://bioconductor.org/packages/Biostrings")
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(synopsis "String objects and algorithms for biological sequences")
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(description
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"This package provides memory efficient string containers, string
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matching algorithms, and other utilities, for fast manipulation of large
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biological sequences or sets of sequences.")
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(license license:artistic2.0)))
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(define-public r-rsamtools
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(define-public r-rsamtools
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(package
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(package
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(name "r-rsamtools")
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(name "r-rsamtools")
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