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gnu: crossmap: Update to 0.3.8. 

* gnu/packages/bioinformatics.scm (crossmap): Update to 0.3.8.
[arguments]: Remove to build with default Python.
[inputs]: Add python-pybigwig; replace python2-bx-python, python2-numpy, and
python2-pysam with their Python 3 variants.
[native-inputs]: Replace python2-cython and python2-nose with their Python 3
variants.
master
Ricardo Wurmus 2020-02-26 13:14:57 +01:00
parent a86fc40dc3
commit b38dd34f40
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GPG Key ID: 197A5888235FACAC
1 changed files with 8 additions and 8 deletions
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gnu/packages/bioinformatics.scm
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@ -2272,23 +2272,23 @@ time.")
(define-public crossmap
(package
(name "crossmap")
(version "0.2.9")
(version "0.3.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "CrossMap" version))
(sha256
(base32
"1byhclrqnqpvc1rqkfh4jwj6yhn0x9y7jk47i0qcjlhk0pjkw92p"))))
"1sb2f2qbxya4fzw3yjl09vbrs8vfmw22zrygrvz004sf9gb1vkan"))))
(build-system python-build-system)
(arguments `(#:python ,python-2))
(inputs
`(("python-bx-python" ,python2-bx-python)
("python-numpy" ,python2-numpy)
("python-pysam" ,python2-pysam)
`(("python-bx-python" ,python-bx-python)
("python-numpy" ,python-numpy)
("python-pybigwig" ,python-pybigwig)
("python-pysam" ,python-pysam)
("zlib" ,zlib)))
(native-inputs
`(("python-cython" ,python2-cython)
("python-nose" ,python2-nose)))
`(("python-cython" ,python-cython)
("python-nose" ,python-nose)))
(home-page "http://crossmap.sourceforge.net/")
(synopsis "Convert genome coordinates between assemblies")
(description