gnu: python-pybedtools: Update to 0.9.0.
* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.9.0. [description]: Update to satisfy guix lint. [license]: Update to expat and lgpl2.1+.
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@ -830,13 +830,13 @@ servers supporting the protocol.")
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(define-public python-pybedtools
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(package
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(name "python-pybedtools")
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(version "0.8.2")
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(version "0.9.0")
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(source (origin
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(method url-fetch)
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(uri (pypi-uri "pybedtools" version))
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(sha256
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(base32
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"0wc7z8g8prgdx7n5chjva2fdq03wiwhqisjjxzkjg1j5k5ha7151"))))
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"18rhzk08d3rpxhi5xh6pqg64x6v5q3daw6y3v54k85v4swncjrwj"))))
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(build-system python-build-system)
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(arguments
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`(#:modules ((srfi srfi-26)
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@ -896,11 +896,16 @@ servers supporting the protocol.")
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(home-page "https://pythonhosted.org/pybedtools/")
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(synopsis "Python wrapper for BEDtools programs")
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(description
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"pybedtools is a Python wrapper for Aaron Quinlan's BEDtools programs,
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"This package is a Python wrapper for Aaron Quinlan's BEDtools programs,
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which are widely used for genomic interval manipulation or \"genome algebra\".
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pybedtools extends BEDTools by offering feature-level manipulations from with
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Python.")
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(license license:gpl2+)))
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;; pypi lists GPLv2 in the PKG-INFO and website, but was relicensed in
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;; version 0.9.0 and the LICENSE.txt is consistant with the source code.
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;;
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;; pybedtools/include/gzstream.cpp and pybedtools/include/gzstream.h are
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;; licensed lgpl2.1+
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(license (list license:expat license:lgpl2.1+))))
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(define-public python-biom-format
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(package
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