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gnu: python-pybedtools: Update to 0.9.0.

* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.9.0.
  [description]: Update to satisfy guix lint.
  [license]: Update to expat and lgpl2.1+.
Vagrant Cascadian 2022-06-09 23:03:03 -07:00 committed by Vagrant Cascadian
parent 7795a5dd6b
commit b483ef1a88
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1 changed files with 9 additions and 4 deletions

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@ -830,13 +830,13 @@ servers supporting the protocol.")
(define-public python-pybedtools
(package
(name "python-pybedtools")
(version "0.8.2")
(version "0.9.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pybedtools" version))
(sha256
(base32
"0wc7z8g8prgdx7n5chjva2fdq03wiwhqisjjxzkjg1j5k5ha7151"))))
"18rhzk08d3rpxhi5xh6pqg64x6v5q3daw6y3v54k85v4swncjrwj"))))
(build-system python-build-system)
(arguments
`(#:modules ((srfi srfi-26)
@ -896,11 +896,16 @@ servers supporting the protocol.")
(home-page "https://pythonhosted.org/pybedtools/")
(synopsis "Python wrapper for BEDtools programs")
(description
"pybedtools is a Python wrapper for Aaron Quinlan's BEDtools programs,
"This package is a Python wrapper for Aaron Quinlan's BEDtools programs,
which are widely used for genomic interval manipulation or \"genome algebra\".
pybedtools extends BEDTools by offering feature-level manipulations from with
Python.")
(license license:gpl2+)))
;; pypi lists GPLv2 in the PKG-INFO and website, but was relicensed in
;; version 0.9.0 and the LICENSE.txt is consistant with the source code.
;;
;; pybedtools/include/gzstream.cpp and pybedtools/include/gzstream.h are
;; licensed lgpl2.1+
(license (list license:expat license:lgpl2.1+))))
(define-public python-biom-format
(package