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gnu: r-cytolib: Fix r-rhdf5libs linking. 

* gnu/packages/bioconductor.scm (r-cytolib): [arguments]: Avoid to have a
plain directory on the list of libraries to link.

Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
master
zimoun 2020-12-04 03:06:21 +01:00 committed by Ricardo Wurmus
parent c5ae5c1c40
commit b58c4e7613
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1 changed files with 11 additions and 0 deletions
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gnu/packages/bioconductor.scm
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@ -6009,6 +6009,17 @@ cluster count and membership by stability evidence in unsupervised analysis.")
"1wylzps7wbvm64k62w5bbi8l74gaqca96psfapxfg6mcac5yz4qw")))) "1wylzps7wbvm64k62w5bbi8l74gaqca96psfapxfg6mcac5yz4qw"))))
(properties `((upstream-name . "cytolib"))) (properties `((upstream-name . "cytolib")))
(build-system r-build-system) (build-system r-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-linking
(lambda _
(substitute* "src/Makevars.in"
;; This is to avoid having a plain directory on the list of
;; libraries to link.
(("\\(RHDF5_LIBS\\)" match)
(string-append match "/libhdf5.a")))
#t)))))
(inputs (inputs
`(("zlib" ,zlib))) `(("zlib" ,zlib)))
(native-inputs (native-inputs