gnu: r-aroma-light: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-aroma-light): Move from here... * gnu/packages/bioconductor.scm (r-aroma-light): ...to here.master
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@ -1987,6 +1987,33 @@ annotation data packages using SQLite data storage.")
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databases. Packages produced are intended to be used with AnnotationDbi.")
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databases. Packages produced are intended to be used with AnnotationDbi.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-aroma-light
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(package
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(name "r-aroma-light")
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(version "3.20.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "aroma.light" version))
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(sha256
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(base32
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"0pi37rlfqh24p9wd7l1xb3f7c7938xdscgcc5agp8c9qhajq25a0"))))
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(properties `((upstream-name . "aroma.light")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-matrixstats" ,r-matrixstats)
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("r-r-methodss3" ,r-r-methodss3)
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("r-r-oo" ,r-r-oo)
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("r-r-utils" ,r-r-utils)))
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(home-page "https://github.com/HenrikBengtsson/aroma.light")
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(synopsis "Methods for normalization and visualization of microarray data")
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(description
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"This package provides methods for microarray analysis that take basic
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data types such as matrices and lists of vectors. These methods can be used
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standalone, be utilized in other packages, or be wrapped up in higher-level
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classes.")
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(license license:gpl2+)))
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(define-public r-biobase
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(define-public r-biobase
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(package
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(package
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(name "r-biobase")
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(name "r-biobase")
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@ -9196,33 +9196,6 @@ their variance is independent of the mean, and they are usually more sensitive
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and specific in detecting differential transcription.")
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and specific in detecting differential transcription.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-aroma-light
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(package
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(name "r-aroma-light")
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(version "3.20.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "aroma.light" version))
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(sha256
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(base32
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"0pi37rlfqh24p9wd7l1xb3f7c7938xdscgcc5agp8c9qhajq25a0"))))
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(properties `((upstream-name . "aroma.light")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-matrixstats" ,r-matrixstats)
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("r-r-methodss3" ,r-r-methodss3)
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("r-r-oo" ,r-r-oo)
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("r-r-utils" ,r-r-utils)))
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(home-page "https://github.com/HenrikBengtsson/aroma.light")
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(synopsis "Methods for normalization and visualization of microarray data")
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(description
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"This package provides methods for microarray analysis that take basic
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data types such as matrices and lists of vectors. These methods can be used
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standalone, be utilized in other packages, or be wrapped up in higher-level
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classes.")
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(license license:gpl2+)))
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(define-public r-deseq
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(define-public r-deseq
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(package
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(package
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(name "r-deseq")
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(name "r-deseq")
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