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gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Use bioconductor-uri. 

* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
master
Ricardo Wurmus 2019-12-04 09:34:13 +01:00
parent 1afdf41b49
commit c271d99025
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1 changed files with 2 additions and 9 deletions
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gnu/packages/bioconductor.scm
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@ -573,21 +573,14 @@ database is exposed as a @code{TxDb} object.")
(version "3.4.7")
(source (origin
(method url-fetch)
;; We cannot use bioconductor-uri here because this tarball is
;; located under "data/annotation/" instead of "bioc/".
(uri (string-append "https://www.bioconductor.org/packages/"
"release/data/annotation/src/contrib/"
"TxDb.Mmusculus.UCSC.mm10.knownGene_"
version ".tar.gz"))
(uri (bioconductor-uri "TxDb.Mmusculus.UCSC.mm10.knownGene"
version 'annotation))
(sha256
(base32
"04impkl8zh1gpwwrpbf19jqznsjrq2306yyhm6cmx6hr1401bd6b"))))
(properties
`((upstream-name . "TxDb.Mmusculus.UCSC.mm10.knownGene")))
(build-system r-build-system)
;; As this package provides little more than a very large data file it
;; doesn't make sense to build substitutes.
(arguments `(#:substitutable? #f))
(propagated-inputs
`(("r-bsgenome" ,r-bsgenome)
("r-genomicfeatures" ,r-genomicfeatures)