me
/
guix
Archived
1
0
Fork 0

gnu: Add r-graphite.

* gnu/packages/bioconductor.scm (r-graphite): New variable.
master
Ricardo Wurmus 2019-12-18 15:24:13 +01:00
parent 3eacc8fa8f
commit c373223e63
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 27 additions and 0 deletions

View File

@ -7011,3 +7011,30 @@ tidying methods. Tidying data makes it easy to recombine, reshape and
visualize bioinformatics analyses.")
;; Any version of the LGPL.
(license license:lgpl3+)))
(define-public r-graphite
(package
(name "r-graphite")
(version "1.32.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "graphite" version))
(sha256
(base32
"1r9fk0cpdwm7012pa85dkjcpkml2j89zcznpf4hfdz66anfyyycd"))))
(properties `((upstream-name . "graphite")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-checkmate" ,r-checkmate)
("r-graph" ,r-graph)
("r-httr" ,r-httr)
("r-rappdirs" ,r-rappdirs)))
(home-page "https://bioconductor.org/packages/graphite/")
(synopsis "Networks from pathway databases")
(description
"Graphite provides networks derived from eight public pathway databases,
and automates the conversion of node identifiers (e.g. from Entrez IDs to gene
symbols).")
(license license:agpl3+)))