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gnu: Add r-bsgenome-hsapiens-ncbi-grch38.

* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ncbi-grch38): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
master
Mădălin Ionel Patrașcu 2020-02-25 14:52:25 +01:00 committed by Ricardo Wurmus
parent 1fc47a9b49
commit c51c0033d0
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@ -224,6 +224,30 @@ Finder (TRF mask). Only the AGAPS and AMB masks are \"active\" by default.")
1000genomes phase2 reference genome sequence (hs37d5), based on NCBI GRCh37.") 1000genomes phase2 reference genome sequence (hs37d5), based on NCBI GRCh37.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-bsgenome-hsapiens-ncbi-grch38
(package
(name "r-bsgenome-hsapiens-ncbi-grch38")
(version "1.3.1000")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BSgenome.Hsapiens.NCBI.GRCh38"
version 'annotation))
(sha256
(base32
"0y75qdq578fh6420vbvsbwmdw8jvr3g06qli2h3vj3pxmjykh9c1"))))
(properties `((upstream-name . "BSgenome.Hsapiens.NCBI.GRCh38")))
(build-system r-build-system)
(propagated-inputs `(("r-bsgenome" ,r-bsgenome)))
(home-page
"https://bioconductor.org/packages/release/data/annotation/html/\
BSgenome.Hsapiens.NCBI.GRCh38.html")
(synopsis "Full genome sequences for Homo sapiens (GRCh38)")
(description
"This package provides full genome sequences for Homo sapiens (Human) as
provided by NCBI (GRCh38, 2013-12-17) and stored in Biostrings objects.")
(license license:artistic2.0)))
(define-public r-bsgenome-hsapiens-ucsc-hg19-masked (define-public r-bsgenome-hsapiens-ucsc-hg19-masked
(package (package
(name "r-bsgenome-hsapiens-ucsc-hg19-masked") (name "r-bsgenome-hsapiens-ucsc-hg19-masked")