gnu: hdf5: Default to 1.10.
This is a followup to 5930963555
.
* gnu/packages/maths.scm (hdf5): Change to HDF5-1.10.
(hdf-java, hdf-eos5, h5check, netcdf, matio)[inputs]: Use HDF5-1.8.
* gnu/packages/java.scm (java-cisd-jhdf5)[inputs]: Likewise.
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@ -3296,7 +3296,7 @@ libraries from the SIS division at ETH Zurich like jHDF5.")
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("java-cisd-args4j" ,java-cisd-args4j)
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("java-commons-lang" ,java-commons-lang)
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("java-commons-io" ,java-commons-io)
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("hdf5" ,hdf5)
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("hdf5" ,hdf5-1.8)
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("zlib" ,zlib)))
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(native-inputs
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`(("jdk" ,icedtea-8)
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@ -1203,7 +1203,7 @@ extremely large and complex data collections.")
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(define-public hdf5
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;; Default version of HDF5.
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hdf5-1.8)
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hdf5-1.10)
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(define-public hdf-java
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(package
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@ -1235,7 +1235,7 @@ extremely large and complex data collections.")
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("slf4j-simple" ,java-slf4j-simple)))
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(inputs
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`(("hdf4" ,hdf4)
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("hdf5" ,hdf5)
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("hdf5" ,hdf5-1.8)
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("zlib" ,zlib)
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("libjpeg" ,libjpeg-turbo)
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("slf4j-api" ,java-slf4j-api)))
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@ -1395,7 +1395,7 @@ System (Grid, Point and Swath).")
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`(("gfortran" ,gfortran)))
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(build-system gnu-build-system)
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(inputs
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`(("hdf5" ,hdf5)
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`(("hdf5" ,hdf5-1.8)
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("zlib" ,zlib)
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("gctp" ,gctp)))
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(arguments
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@ -1496,7 +1496,7 @@ Blosc-compressed datasets.")
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(base32
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"1gm76jbwhz9adbxgn14zx8cj33dmjdr2g5xcy0m9c2gakp8w59kj"))))
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(build-system gnu-build-system)
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(inputs `(("hdf5" ,hdf5))) ;h5cc for tests
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(inputs `(("hdf5" ,hdf5-1.8))) ;h5cc for tests
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(home-page "https://www.hdfgroup.org/products/hdf5_tools/h5check.html")
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(synopsis "HDF5 format checker")
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(description "@code{h5check} is a validation tool for verifying that an
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@ -1556,7 +1556,10 @@ similar to MATLAB, GNU Octave or SciPy.")
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("graphviz" ,graphviz)))
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(inputs
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`(("hdf4" ,hdf4-alt)
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("hdf5" ,hdf5)
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;; XXX: The 'tst_nccopy4.sh' test fails when using hdf5-1.10.
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("hdf5" ,hdf5-1.8)
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("zlib" ,zlib)
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("libjpeg" ,libjpeg-turbo)))
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(arguments
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@ -4537,7 +4540,7 @@ structured and unstructured grid problems.")))
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(build-system gnu-build-system)
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(inputs
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`(("zlib" ,zlib)
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("hdf5" ,hdf5)))
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("hdf5" ,hdf5-1.8)))
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(home-page "http://matio.sourceforge.net/")
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(synopsis "Library for reading and writing MAT files")
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(description "Matio is a library for reading and writing MAT files. It
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