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gnu: Add r-singscore.

* gnu/packages/bioconductor.scm (r-singscore): New variable.
Ricardo Wurmus 2023-07-19 14:59:11 +02:00
parent f77216721e
commit c5f9e435da
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@ -9306,6 +9306,44 @@ this package. It also provides functionalities for visualizing, summarizing
and comparing the clusterings.")
(license license:expat)))
(define-public r-singscore
(package
(name "r-singscore")
(version "1.20.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "singscore" version))
(sha256
(base32
"1s1kyvkbfgwskf0hi4b44c2yx256rjp1yk9ijpld9qlm7z7pi67q"))))
(properties `((upstream-name . "singscore")))
(build-system r-build-system)
(propagated-inputs (list r-biobase
r-biocparallel
r-edger
r-ggplot2
r-ggrepel
r-gseabase
r-magrittr
r-matrixstats
r-plotly
r-plyr
r-rcolorbrewer
r-reshape
r-reshape2
r-s4vectors
r-summarizedexperiment
r-tidyr))
(native-inputs (list r-knitr))
(home-page "https://davislaboratory.github.io/singscore/")
(synopsis "Rank-based single-sample gene set scoring method")
(description
"This package provides a simple single-sample gene signature scoring
method that uses rank-based statistics to analyze the sample's gene expression
profile. It scores the expression activities of gene sets at a single-sample
level.")
(license license:gpl3)))
(define-public r-tkwidgets
(package
(name "r-tkwidgets")