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@ -15058,6 +15058,34 @@ copy number estimation, as described by
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@url{doi:10.1016/j.cell.2012.04.023,Nik-Zainal et al.}")
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(license license:gpl3)))
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(define-public r-catch
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(let ((commit "196ddd5a51b1a5f5daa01de53fdaad9b7505e084")
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(revision "1"))
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(package
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(name "r-catch")
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(version (git-version "1.0" revision commit))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/zhanyinx/CaTCH")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"11c7f1fc8f57wnwk1hrgr5y814m80zj8gkz5021vxyxy2v02cqgd"))))
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(build-system r-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'chdir
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(lambda _ (chdir "CaTCH"))))))
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(home-page "https://github.com/zhanyinx/CaTCH_R")
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(synopsis "Call a hierarchy of domains based on Hi-C data")
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(description "This package allows building the hierarchy of domains
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starting from Hi-C data. Each hierarchical level is identified by a minimum
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value of physical insulation between neighboring domains.")
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(license license:gpl2+))))
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(define-public r-spectre
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(let ((commit "f6648ab3eb9499300d86502b5d60ec370ae9b61a")
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(revision "1"))
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