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gnu: Add r-catch.

* gnu/packages/bioinformatics.scm (r-catch): New variable.
master
Ricardo Wurmus 2021-09-01 14:52:12 +02:00
parent 96e487b310
commit c75b30d58f
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1 changed files with 28 additions and 0 deletions

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@ -15058,6 +15058,34 @@ copy number estimation, as described by
@url{doi:10.1016/j.cell.2012.04.023,Nik-Zainal et al.}")
(license license:gpl3)))
(define-public r-catch
(let ((commit "196ddd5a51b1a5f5daa01de53fdaad9b7505e084")
(revision "1"))
(package
(name "r-catch")
(version (git-version "1.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/zhanyinx/CaTCH")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"11c7f1fc8f57wnwk1hrgr5y814m80zj8gkz5021vxyxy2v02cqgd"))))
(build-system r-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'chdir
(lambda _ (chdir "CaTCH"))))))
(home-page "https://github.com/zhanyinx/CaTCH_R")
(synopsis "Call a hierarchy of domains based on Hi-C data")
(description "This package allows building the hierarchy of domains
starting from Hi-C data. Each hierarchical level is identified by a minimum
value of physical insulation between neighboring domains.")
(license license:gpl2+))))
(define-public r-spectre
(let ((commit "f6648ab3eb9499300d86502b5d60ec370ae9b61a")
(revision "1"))