gnu: Add r-stringdb.
* gnu/packages/bioconductor.scm (r-stringdb): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>master
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@ -4386,6 +4386,39 @@ events and allows for the incorporation of prior knowledge through supervised
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graph construction.")
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(license license:artistic2.0)))
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(define-public r-stringdb
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(package
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(name "r-stringdb")
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(version "2.6.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "STRINGdb" version))
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(sha256
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(base32 "1hvb73anhbf1g82nn5m11s783z6ihvlavf7p30w29qggxggnl6lm"))))
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(properties `((upstream-name . "STRINGdb")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-gplots" ,r-gplots)
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("r-hash" ,r-hash)
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("r-igraph" ,r-igraph)
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("r-plotrix" ,r-plotrix)
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("r-plyr" ,r-plyr)
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("r-png" ,r-png)
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("r-rcolorbrewer" ,r-rcolorbrewer)
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("r-rcurl" ,r-rcurl)
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("r-sqldf" ,r-sqldf)))
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(home-page "https://git.bioconductor.org/packages/STRINGdb")
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(synopsis "Search tool for the retrieval of interacting proteins database")
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(description
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"The @code{STRINGdb} package provides an R interface to the STRING
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protein-protein interactions database. @url{https://www.string-db.org,
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STRING} is a database of known and predicted protein-protein interactions.
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The interactions include direct (physical) and indirect (functional)
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associations. Each interaction is associated with a combined confidence score
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that integrates the various evidences.")
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(license license:gpl2)))
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(define-public r-structuralvariantannotation
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(package
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(name "r-structuralvariantannotation")
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