gnu: Add r-scopeloomr.
* gnu/packages/bioinformatics.scm (r-scopeloomr): New variable.master
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@ -13883,6 +13883,35 @@ vast-tools, an RNA-Seq pipeline for alternative splicing analysis. The plots
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are generated using @code{ggplot2}.")
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(license license:expat)))
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(define-public r-scopeloomr
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(let ((commit "99726f5f7da794042036b73924b6a10d6e7b4d5d")
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(revision "1"))
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(package
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(name "r-scopeloomr")
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(version (git-version "0.13.0" revision commit))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/aertslab/SCopeLoomR")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "1ci17ms0c0hf7yfp9ckcg7a2y1s0nm19jj3cifsd55hwc0gdglmz"))))
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(properties `((upstream-name . "SCopeLoomR")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-base64enc r-hdf5r r-igraph r-matrix r-plyr r-rjson r-rlist))
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(home-page "https://github.com/aertslab/SCopeLoomR")
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(synopsis "Build .loom files and extract data from them")
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(description
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"This is an R package to build generic @code{.loom} files aligning with
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the default naming convention of the @code{.loom} format and to integrate
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other data types e.g.: regulons (SCENIC), clusters from Seurat, trajectory
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information... The package can also be used to extract data from @code{.loom}
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files.")
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(license license:expat))))
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(define-public vbz-compression
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(package
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(name "vbz-compression")
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