gnu: Add r-pwalign.
* gnu/packages/bioconductor.scm (r-pwalign): New variable. Change-Id: I6a12f48c5de948292af7c6888b12e849e1f42db7master
parent
155ac301f7
commit
cf3471cc9e
|
@ -10381,6 +10381,30 @@ batch correction and normalization.")
|
|||
proteomics packages.")
|
||||
(license license:artistic2.0)))
|
||||
|
||||
(define-public r-pwalign
|
||||
(package
|
||||
(name "r-pwalign")
|
||||
(version "1.0.0")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (bioconductor-uri "pwalign" version))
|
||||
(sha256
|
||||
(base32 "1m0j1m5jif5spd9fkpzz3z3c9s8vwiy8xvpx8rz8igxj89rwrwb7"))))
|
||||
(properties `((upstream-name . "pwalign")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs (list r-biocgenerics r-biostrings r-iranges r-s4vectors
|
||||
r-xvector))
|
||||
(home-page "https://bioconductor.org/packages/pwalign")
|
||||
(synopsis "Perform pairwise sequence alignments")
|
||||
(description
|
||||
"The two main functions in the package are @code{pairwiseAlignment} and
|
||||
@code{stringDist}. The former solves (Needleman-Wunsch) global alignment,
|
||||
(Smith-Waterman) local alignment, and (ends-free) overlap alignment problems.
|
||||
The latter computes the Levenshtein edit distance or pairwise alignment score
|
||||
matrix for a set of strings.")
|
||||
(license license:artistic2.0)))
|
||||
|
||||
(define-public r-rbgl
|
||||
(package
|
||||
(name "r-rbgl")
|
||||
|
|
Reference in New Issue