From d0a5503752cab62efbaa06bd00fb92145e015732 Mon Sep 17 00:00:00 2001 From: zimoun Date: Fri, 21 May 2021 22:25:55 +0200 Subject: [PATCH] gnu: r-keggrest: Move to (gnu packages bioconductor). * gnu/packages/bioinformatics.scm (r-keggrest): Move from here... * gnu/packages/bioconductor.scm (r-keggrest): ...to here. --- gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++ gnu/packages/bioinformatics.scm | 26 -------------------------- 2 files changed, 26 insertions(+), 26 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 25094e771e..28e8810bbc 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2839,6 +2839,32 @@ microarray data, using nearest neighbor averaging.") Shiny-based display methods for Bioconductor objects.") (license license:artistic2.0))) +(define-public r-keggrest + (package + (name "r-keggrest") + (version "1.30.1") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "KEGGREST" version)) + (sha256 + (base32 + "0k9z85xf9la2y98xqmdmjb8mci9fh2fdybkl77x1yl26hyalip0s")))) + (properties `((upstream-name . "KEGGREST"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biostrings" ,r-biostrings) + ("r-httr" ,r-httr) + ("r-png" ,r-png))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/KEGGREST") + (synopsis "Client-side REST access to KEGG") + (description + "This package provides a package that provides a client interface to the +@dfn{Kyoto Encyclopedia of Genes and Genomes} (KEGG) REST server.") + (license license:artistic2.0))) + (define-public r-limma (package (name "r-limma") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index df0d4e73c1..8188b50ad6 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9168,32 +9168,6 @@ their variance is independent of the mean, and they are usually more sensitive and specific in detecting differential transcription.") (license license:artistic2.0))) -(define-public r-keggrest - (package - (name "r-keggrest") - (version "1.30.1") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "KEGGREST" version)) - (sha256 - (base32 - "0k9z85xf9la2y98xqmdmjb8mci9fh2fdybkl77x1yl26hyalip0s")))) - (properties `((upstream-name . "KEGGREST"))) - (build-system r-build-system) - (propagated-inputs - `(("r-biostrings" ,r-biostrings) - ("r-httr" ,r-httr) - ("r-png" ,r-png))) - (native-inputs - `(("r-knitr" ,r-knitr))) - (home-page "https://bioconductor.org/packages/KEGGREST") - (synopsis "Client-side REST access to KEGG") - (description - "This package provides a package that provides a client interface to the -@dfn{Kyoto Encyclopedia of Genes and Genomes} (KEGG) REST server.") - (license license:artistic2.0))) - (define-public r-gage (package (name "r-gage")