gnu: Add r-r3cseq.
* gnu/packages/bioconductor.scm (r-r3cseq): New variable. Change-Id: Ib62db1415ef3988ccef88ad600192246964b4d84
parent
c0895371c5
commit
d24c1078d2
|
@ -7747,6 +7747,38 @@ matrix to solve the memory problem.")
|
||||||
the Human Protein Atlas project.")
|
the Human Protein Atlas project.")
|
||||||
(license license:artistic2.0)))
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
|
(define-public r-r3cseq
|
||||||
|
(package
|
||||||
|
(name "r-r3cseq")
|
||||||
|
(version "1.46.0")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "r3Cseq" version))
|
||||||
|
(sha256
|
||||||
|
(base32 "1wpjsiy9qh45h3k5s79w4zhkma5h4gvyf2sa8l934mx0jl16k0q2"))))
|
||||||
|
(properties `((upstream-name . "r3Cseq")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs
|
||||||
|
(list r-biostrings
|
||||||
|
r-data-table
|
||||||
|
r-genomeinfodb
|
||||||
|
r-genomicranges
|
||||||
|
r-iranges
|
||||||
|
r-qvalue
|
||||||
|
r-rcolorbrewer
|
||||||
|
r-rsamtools
|
||||||
|
r-rtracklayer
|
||||||
|
r-sqldf
|
||||||
|
r-vgam))
|
||||||
|
(home-page "http://r3cseq.genereg.net/Site/index.html")
|
||||||
|
(synopsis
|
||||||
|
"Analysis of Chromosome conformation capture and Next-generation sequencing")
|
||||||
|
(description
|
||||||
|
"This package is used for the analysis of long-range chromatin
|
||||||
|
interactions from 3C-seq assay.")
|
||||||
|
(license license:gpl3)))
|
||||||
|
|
||||||
(define-public r-raggedexperiment
|
(define-public r-raggedexperiment
|
||||||
(package
|
(package
|
||||||
(name "r-raggedexperiment")
|
(name "r-raggedexperiment")
|
||||||
|
|
Reference in New Issue